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Seed Handling
addSeed
addSeeds
appendDiag
bandedAlignment
bandedChainAlignment
endDiagonal
extendSeed
extendSeeds
getAlignment
globalChaining
leftDiagonal
leftDim0
leftDim1
maximumDistance
obtainID
qualityValue
releaseID
rightDiagonal
rightDim0
rightDim1
scoreSeed
seedScore
setLeftDiagonal
setLeftDim0
setLeftDim1
setMaximumDistance
setQualityValue
setRightDiagonal
setRightDim0
setRightDim1
startDiagonal
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